Company lists · Data refreshed September 2026

Top 25 Transcriptomics software companies based in the United States

RevenueBase identified 586 transcriptomics software companies headquartered in the United States as of September 2026 and tracks 27,077 professional contacts across them, including 12,688 with verified work emails and 10,472 with mobile numbers. San Diego is the largest hub.

This list covers transcriptomics software companies headquartered in the United States, matched on what each company actually does as described in its own words. Ranked by team size, largest first. Every row shows the company's own description, its RevenueBase Smart Search rating, and when it was last checked. Data refreshed September 6, 2026.

Published by RevenueBase, a B2B data infrastructure company. This list was built with RevenueBase Smart Search, the natural-language company search RevenueBase customers use to build their own targeted lists and unlock verified emails and direct dials at the companies on them. How these lists are built and judged.

How to read this list HQ checked on every row RevenueBase Smart Search rating on every row Refreshed Sep 6, 2026 86% judged on-target in blind review
586Companies
27,077Contacts tracked
12,688Verified emails
10,472Mobile numbers
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The 25 largest transcriptomics software companies based in the United States

Ranked by team size
Top 25 of 586 transcriptomics software companies based in the United States, ranked by team size, largest first. Data refreshed Sep 6, 2026. RevenueBase Smart Search rates how each company's information relates to transcriptomics software companies: strong evidence (its own description names it), partial (names part of it), indirect (matched on the rest of its profile rather than the description shown). Click a contact count to view that company's people.
#CompanyRevenueBase Smart SearchHeadquartersEmployeesContacts
1Indirect evidenceSan Diego, CA, United StatesHQ checked Sep 6, 20265,001-10,0008,987 contacts →

“At Illumina, our goal is to apply innovative technologies and revolutionary assays to the analysis of genetic variation and function, making studies possible that were not even…”

Source: company website · checked Sep 6, 2026
2Indirect evidenceIrving, TX, United StatesHQ checked Sep 6, 20261,001-5,0001,556 contacts →

“Caris Life Sciences® (Caris) is the leading next-generation TechBio company and precision medicine pioneer that is actively developing and delivering innovative solutions to…”

Source: company website · checked Sep 6, 2026
3Indirect evidenceSouth San Francisco, CA, United StatesHQ checked Sep 6, 2026501-1,0001,230 contacts →

“Twist Bioscience is a synthetic biology company based in South San Francisco, California.”

Source: company website · checked Sep 6, 2026
4Indirect evidenceMenlo Park, CA, United StatesHQ checked Sep 6, 2026501-1,000636 contacts →

“At PacBio, we’re devoted to empowering you.”

Source: company website · checked Sep 6, 2026
5Indirect evidenceSouth San Francisco, CA, United StatesHQ checked Sep 6, 2026501-1,000550 contacts →

“Standard BioTools delivers the leading proteomic and multi-omic solutions that enable researchers to discover unique biological insights not accessible by other technologies.”

Source: company website · checked Sep 6, 2026
6Indirect evidenceCharlestown, MA, United StatesHQ checked Sep 6, 2026501-1,000369 contacts →

“Velsera was formed in 2023 through the shared vision of Seven Bridges and Pierian, with a mission to accelerate the discovery, development, and delivery of life-changing insights.”

Source: company website · checked Sep 6, 2026
7Indirect evidenceSan Diego, CA, United StatesHQ checked Sep 6, 2026201-500331 contacts →

“TriLink BioTechnologies, a Maravai LifeSciences company, is a global leader in nucleic acid and mRNA solutions.”

Source: company website · checked Sep 6, 2026
8Indirect evidencePine Brook, NJ, United StatesHQ checked Sep 6, 2026201-500309 contacts →

“With over 18 years of experience in the medical field.”

Source: company website · checked Sep 6, 2026
9Indirect evidenceFremont, CA, United StatesHQ checked Sep 6, 2026201-500306 contacts →

“Ultima Genomics is unleashing the power of genomics at scale.”

Source: company website · checked Sep 6, 2026
10Indirect evidenceSeattle, WA, United StatesHQ checked Sep 6, 2026501-1,000303 contacts →

“NanoString Technologies, a Bruker Company, is a provider of life science tools for translational research.”

Source: company website · checked Sep 6, 2026
11Indirect evidenceRedwood City, CA, United StatesHQ checked Sep 6, 2026501-1,000281 contacts →

“About Genomic Health Genomic Health, Inc.(NASDAQ: GHDX) is the world's leading provider of genomic-based diagnostic tests that help optimize cancer care by addressing the…”

Source: company website · checked Sep 6, 2026
12Indirect evidenceMountain View, CA, United StatesHQ checked Sep 6, 2026201-500263 contacts →

“Founded in 2009, DNAnexus is the world's most trusted platform for omics data enablement, transforming the most complex data in healthcare into a governed, AI‑ready, reusable…”

Source: company website · checked Sep 6, 2026
13Indirect evidenceSan Jose, CA, United StatesHQ checked Sep 6, 2026201-500263 contacts →

“Takara Bio USA, Inc.(formerly Clontech Laboratories, Inc.), a Takara Bio company, develops, manufactures, and distributes a wide range of life science reagents under the Takara®…”

Source: company website · checked Sep 6, 2026
14Indirect evidenceBoulder, CO, United StatesHQ checked Sep 6, 202651-200228 contacts →

“Watchmaker Genomics is a biotechnology company that specializes in advanced enzymology to develop precision tools for life sciences.”

Source: company website · checked Sep 6, 2026
15Indirect evidenceSan Jose, CA, United StatesHQ checked Sep 6, 2026201-500227 contacts →

“Complete Genomics is a pioneering life sciences company, headquartered in San Jose, California.”

Source: company website · checked Sep 6, 2026
16Indirect evidenceIrvine, CA, United StatesHQ checked Sep 6, 2026201-500224 contacts →

“Since its inception in 1994, Zymo Research has been proudly serving the scientific community by providing innovative, reliable, and high quality research tools at affordable…”

Source: company website · checked Sep 6, 2026
17Indirect evidencePleasanton, CA, United StatesHQ checked Sep 6, 2026201-500219 contacts →

“Here's the deal.”

Source: company website · checked Sep 6, 2026
18Indirect evidenceSouth Plainfield, NJ, United StatesHQ checked Sep 6, 20261,001-5,000198 contacts →

“GENEWIZ from Azenta Life Sciences is a leading global genomics service provider serving researchers worldwide through a suite of solutions including synthesis, Sanger sequencing…”

Source: company website · checked Sep 6, 2026
19Indirect evidenceSan Diego, CA, United StatesHQ checked Sep 6, 2026201-500183 contacts →

“Bionano is a provider of genome analysis solutions that can enable researchers and clinicians to reveal answers to challenging questions in biology and medicine.”

Source: company website · checked Sep 6, 2026
20Indirect evidenceFremont, CA, United StatesHQ checked Sep 6, 2026201-500181 contacts →

“Alamar Biosciences is powering precision proteomics with automated, high throughput solutions for ultra-high sensitivity protein analysis across a range of multiplex levels.”

Source: company website · checked Sep 6, 2026
21Indirect evidenceTinley Park, IL, United StatesHQ checked Sep 6, 2026201-500179 contacts →

“Hematogenix, a global cancer-focused life science company serving the pharmaceutical & biotechnology industry as well as community physicians.”

Source: company website · checked Sep 6, 2026
22Indirect evidenceCambridge, MA, United StatesHQ checked Sep 6, 202651-200160 contacts →

“Ultivue recently merged with Vizgen to lead the next frontier of innovation in spatial biology and multi-omics.”

Source: company website · checked Sep 6, 2026
23Indirect evidenceIndianapolis, IN, United StatesHQ checked Sep 6, 202651-200160 contacts →

“Roche is dedicated to advancing personalized healthcare by creating diagnostics and treatments tailored to individual genetic and disease profiles.”

Source: company website · checked Sep 6, 2026
24Indirect evidenceSan Carlos, WA, United StatesHQ checked Sep 6, 202651-200155 contacts →

“Born from the founders’ recognition that their diverse but complementary skills and experiences would enable them to successfully address challenges that others had not, Nautilus…”

Source: company website · checked Sep 6, 2026
25Indirect evidenceWoburn, MA, United StatesHQ checked Sep 6, 202651-200136 contacts →

“Covaris, a PerkinElmer Company, is a leader in sample preparation solutions across multiomics research and clinical applications.”

Source: company website · checked Sep 6, 2026

Showing 25 of 586 transcriptomics software companies based in the United States

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Transcriptomics software companies based in the United States at a glance

As of Sep 6, 2026
46.9%Verified-email coverage
38.7%Mobile-number coverage
46.2Average contacts per company
11-50Median size (employees)
8.4%Largest-city concentration · San Diego
Sep 6, 2026Page data refreshed

Companies by employee count

1-10
275
11-50
192
51-200
77
201-500
27
501-1,000
11
1,001-5,000
2
5,001-10,000
1
10001+
1

Freshness & accuracy

How recently the business emails on this list were verified

Email last verified

How this list was built

Company categories are rarely black and white. RevenueBase reads each company's own description of its business to decide whether it belongs among transcriptomics software companies, so some rows will be adjacent to the category rather than pure plays. The description and RevenueBase Smart Search rating on every row are there so you can check each match yourself.

Source
The RevenueBase company graph: 60 million companies and 398.9 million professional contacts resolved from primary sources, queried with RevenueBase Smart Search, the natural-language company search available to every RevenueBase user.
What qualifies
Companies headquartered in the United States whose own description of what they do matches “transcriptomics software companies”. Matching reads each company's description, not its industry code or its name.
RevenueBase Smart Search
RevenueBase Smart Search is how this list is assembled and how each row is rated. RevenueBase's data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to a category defined in a user's own words. Each row is rated strong evidence (its own description names transcriptomics software companies), partial evidence (it names part of the category) or indirect evidence (the description shown names none of it and the match rests on the rest of the company's profile). The description supporting each rating is quoted on the row.
What we exclude
Companies whose own description does not clearly place them among transcriptomics software companies, and records with no verified work email. Companies headquartered outside United States are excluded even when they keep an office there.
Match quality
In blind human judging of this matching method, 86% of matched companies were on target. Expect roughly 1 in 7 rows to be adjacent to the category rather than a pure play. Every row shows the company's own description and its RevenueBase Smart Search rating so you can judge each match yourself. Read the full methodology: how the lists are built, how the judging worked, and what the figure means.
Ranking
Team size, largest first: companies are ordered by the number of professionals RevenueBase tracks at each one. Employee ranges shown are reported bands, for context.
Verification
Every listed company carries at least one verified work email, 12,688 across the full list. Contacts re-verify on a rolling cadence, and each contact's own verification date is shown inside RevenueBase.
Refresh
This page's figures were pulled from the company graph on September 6, 2026. Lists refresh periodically as the graph is re-checked.
Corrections
Wrong category, wrong headquarters, or a company that has closed? Use “Report an issue” on any row. Reports go to the RevenueBase Data Team and feed back into the company graph.

Transcriptomics software companies by metro

  • Transcriptomics software companies in San Diego49

Frequently asked

What is RevenueBase Smart Search?

RevenueBase Smart Search is how RevenueBase decides which companies belong on this list and how strongly each one fits. Its data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to the category the list is about. Each row is rated strong evidence when the company's own description names transcriptomics software companies, partial evidence when it names part of the category, and indirect evidence when the description shown names none of it and the match rests on the rest of the company's profile.

How many transcriptomics software companies are there based in the United States?

RevenueBase identified 586 transcriptomics software companies headquartered in the United States as of September 2026, matched on each company's own description of what it does rather than its industry code.

What is the largest company on this list?

Illumina, headquartered in San Diego, tops this list with the largest team on record.

Which city has the most transcriptomics software companies?

San Diego leads with 49 headquartered companies, followed by Cambridge (22) and San Francisco (19).

How do I get contact information for these companies?

A free RevenueBase account lets you run this exact search and work the top results, verified emails and direct dials included. Upgrading unlocks all 12,688 verified decision-maker contacts tracked across these 586 companies.

How current is this list?

The list refreshes periodically as the company graph is re-checked. This page's figures were pulled on September 6, 2026.

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About this data

RevenueBase is a B2B data infrastructure company. Its company graph covers 60 million companies and 398.9 million professional contacts, with emails verified on a rolling cadence rather than scraped once and left to decay. These company lists are generated directly from that graph with RevenueBase Smart Search, the same natural-language company search every RevenueBase user has: describe a market in plain words, get the companies that match, and add verified emails and direct dials for the people at them. It is the same data that powers RevenueBase's B2B data products, and a free account includes 500 credits to start. How these lists are built and judged.