Company lists · Data refreshed September 2026
Top 19 Drug discovery software companies based in San Francisco, United States
RevenueBase identified 31 drug discovery software companies headquartered in San Francisco, United States as of September 2026 and tracks 294 professional contacts across them, including 114 with verified work emails and 88 with mobile numbers. San Diego is the largest hub.
This list covers drug discovery software companies headquartered in San Francisco, United States, matched on what each company actually does as described in its own words. Ranked by team size, largest first. Every row shows the company's own description, its RevenueBase Smart Search rating, and when it was last checked. Data refreshed September 11, 2026.
Published by RevenueBase, a B2B data infrastructure company. This list was built with RevenueBase Smart Search, the natural-language company search RevenueBase customers use to build their own targeted lists and unlock verified emails and direct dials at the companies on them. How these lists are built and judged.
The 19 largest drug discovery software companies based in San Francisco, United States
Ranked by team size| # | Company | Contacts | |||
|---|---|---|---|---|---|
| 1 | 51 contacts → | ||||
Strong evidence “AI-powered drug discovery platform for rapid molecule screening and testing, from target identification to lab validation.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 2 | 31 contacts → | ||||
Strong evidence “Atomwise is a preclinical pharma company revolutionizing how drugs are discovered with AI.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 3 | 25 contacts → | ||||
Indirect evidence “We’re building the operating system for biology.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 4 | 24 contacts → | ||||
Indirect evidence “Unlocking Protein Assemblies.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 5 | 22 contacts → | ||||
Strong evidence “At Atomic AI, we build artificial intelligence to pioneer new frontiers in drug discovery.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 6 | 20 contacts → | ||||
Indirect evidence “The scientific decision engine for R&D.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 7 | 20 contacts → | ||||
Strong evidence “SyntheX is a biotech company advancing precision drug discovery through synthetic biology.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 8 | 17 contacts → | ||||
Partial evidence “PREMIER Biosoft is a leading bioinformatics company offering software products and services to government agencies, pharmaceutical and biotechnology companies and academia across…” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 9 | 11 contacts → | ||||
Indirect evidence “At we provide web interfaces and APIs for the leading publicly available molecular design tools.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 10 | 10 contacts → | ||||
Partial evidence “Nexentria is a software company with mission of transforming the pharmaceutical landscape by providing innovative, cost-effective digital and AI solutions tailored to the needs of…” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 11 | 9 contacts → | ||||
Partial evidence “Syntensor is building software that converts large biological datasets into decisions.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 12 | 7 contacts → | ||||
Partial evidence “Fee-for-service hit discovery is backwards.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 13 | 5 contacts → | ||||
Strong evidence “Leap Laboratories builds software that enables the new scientific method: data-first discovery.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 14 | 3 contacts → | ||||
Indirect evidence “ExcepGen is a venture-backed, early stage biotechnology company located in San Francisco.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 15 | 3 contacts → | ||||
Indirect evidence “MotionHall, part of @clarivate, helps pharma and biotech companies close more valuable licensing and M&A deals by putting a powerful professional suite of modern technology and…” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 16 | 3 contacts → | ||||
Strong evidence “Accelero Biostructures accelerates structure-based drug discovery and protein engineering using its Synchrotron-integrated platform for High-Throughput Protein X-ray…” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 17 | 3 contacts → | ||||
Partial evidence “AI-accelerated quantum chemistry for rapid drug development.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 18 | 2 contacts → | ||||
Indirect evidence “Binocular Vision is a scientific informatics services company that specializes in projects spanning multiple geographies and organizations.” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
| 19 | 1 contacts → | ||||
Indirect evidence “Welcome to Viitai!” Source: RevenueBase Database · checked Sep 11, 2026Thanks. The Data Team will review it. | |||||
RevenueBase Smart Search
RevenueBase Smart Search assesses information from a company’s LinkedIn profile, information supplied directly by the company, its website, and other publicly available sources. It uses that information to rate how closely the company relates to this list’s category: drug discovery software companies. Every row carries its rating and the description the rating was read from, so each one can be checked rather than taken on trust.
- Strong evidence
- The company's own public description of its business names drug discovery software companies.
- Partial evidence
- Its own public description names part of drug discovery software companies, so it works in or next to the category without describing itself that way.
- Indirect evidence
- The description shown does not name drug discovery software companies. The match rests on the rest of the company's public profile rather than the one sentence quoted here, so this is the rating to check first.
RevenueBase Smart Search is how these lists are built: RevenueBase's data engine and AI assemble the companies that match a category defined in a user's own words, so a list can be about what companies actually do rather than about whichever industry code they were filed under.
Showing 19 of 31 drug discovery software companies based in San Francisco, United States
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Drug discovery software companies based in San Francisco, United States at a glance
As of Sep 11, 2026Companies by employee count
Freshness & accuracy
How recently the business emails were verified and the company information checked
Email last verified
Median 12.0dCompany record updated
Median 55.0dHow this list was built
Company categories are rarely black and white. RevenueBase reads each company's own description of its business to decide whether it belongs among drug discovery software companies, so some rows will be adjacent to the category rather than pure plays. The description and RevenueBase Smart Search rating on every row are there so you can check each match yourself.
- Source
- The RevenueBase company graph: 60 million companies and 398.9 million professional contacts resolved from primary sources, queried with RevenueBase Smart Search, the natural-language company search available to every RevenueBase user.
- What qualifies
- Companies headquartered in San Francisco, United States whose own description of what they do matches “drug discovery software companies”. Matching reads each company's description, not its industry code or its name.
- RevenueBase Smart Search
- RevenueBase Smart Search is how this list is assembled and how each row is rated. RevenueBase's data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to a category defined in a user's own words. Each row is rated strong evidence (its own description names drug discovery software companies), partial evidence (it names part of the category) or indirect evidence (the description shown names none of it and the match rests on the rest of the company's profile). The description supporting each rating is quoted on the row.
- What we exclude
- Companies whose own description does not clearly place them among drug discovery software companies, and records with no verified work email. Companies headquartered outside San Francisco are excluded even when they keep an office there.
- Match quality
- In blind human judging of this matching method, 86% of matched companies were on target. Expect roughly 1 in 7 rows to be adjacent to the category rather than a pure play. Every row shows the company's own description and its RevenueBase Smart Search rating so you can judge each match yourself. Read the full methodology: how the lists are built, how the judging worked, and what the figure means.
- Ranking
- Team size, largest first: companies are ordered by the number of professionals RevenueBase tracks at each one. Employee ranges shown are reported bands, for context.
- Verification
- Every listed company carries at least one verified work email, 114 across the full list. Contacts re-verify on a rolling cadence, and each contact's own verification date is shown inside RevenueBase.
- Refresh
- This page's figures were pulled from the company graph on September 11, 2026. Lists refresh periodically as the graph is re-checked.
- Corrections
- Wrong category, wrong headquarters, or a company that has closed? Use “Report an issue” on any row. Reports go to the RevenueBase Data Team and feed back into the company graph.
Drug discovery software companies by metro in the United States
- Drug discovery software companies in San Diego47
- Drug discovery software companies in San Francisco37
- Drug discovery software companies in Boston34
- Drug discovery software companies in Cambridge26
Frequently asked
What is RevenueBase Smart Search?
RevenueBase Smart Search is how RevenueBase decides which companies belong on this list and how strongly each one fits. Its data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to the category the list is about. Each row is rated strong evidence when the company's own description names drug discovery software companies, partial evidence when it names part of the category, and indirect evidence when the description shown names none of it and the match rests on the rest of the company's profile.
How many drug discovery software companies are there based in San Francisco, United States?
RevenueBase identified 31 drug discovery software companies headquartered in San Francisco, United States as of September 2026, matched on each company's own description of what it does rather than its industry code.
What is the largest company on this list?
OPTIC, headquartered in San Francisco, tops this list with the largest team on record.
Which city has the most drug discovery software companies?
San Diego leads with 47 headquartered companies, followed by San Francisco (37) and Boston (34).
How do I get contact information for these companies?
A free RevenueBase account lets you run this exact search and work the top results, verified emails and direct dials included. Upgrading unlocks all 114 verified decision-maker contacts tracked across these 31 companies.
How current is this list?
The list refreshes periodically as the company graph is re-checked. This page's figures were pulled on September 11, 2026.
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About this data
RevenueBase is a B2B data infrastructure company. Its company graph covers 60 million companies and 398.9 million professional contacts, with emails verified on a rolling cadence rather than scraped once and left to decay. These company lists are generated directly from that graph with RevenueBase Smart Search, the same natural-language company search every RevenueBase user has: describe a market in plain words, get the companies that match, and add verified emails and direct dials for the people at them. It is the same data that powers RevenueBase's B2B data products, and a free account includes 500 credits to start. How these lists are built and judged.
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