Company lists · Data refreshed September 2026

Top 19 Drug discovery software companies based in San Francisco, United States

RevenueBase identified 31 drug discovery software companies headquartered in San Francisco, United States as of September 2026 and tracks 294 professional contacts across them, including 114 with verified work emails and 88 with mobile numbers. San Diego is the largest hub.

This list covers drug discovery software companies headquartered in San Francisco, United States, matched on what each company actually does as described in its own words. Ranked by team size, largest first. Every row shows the company's own description, its RevenueBase Smart Search rating, and when it was last checked. Data refreshed September 11, 2026.

Published by RevenueBase, a B2B data infrastructure company. This list was built with RevenueBase Smart Search, the natural-language company search RevenueBase customers use to build their own targeted lists and unlock verified emails and direct dials at the companies on them. How these lists are built and judged.

How to read this list HQ checked on every row RevenueBase Smart Search rating on every row Refreshed Sep 11, 2026 86% judged on-target in blind review
31Companies
294Contacts tracked
114Verified emails
88Mobile numbers
Explore this list → Free signup · no credit card · 500 free credits

The 19 largest drug discovery software companies based in San Francisco, United States

Ranked by team size
Top 19 of 31 drug discovery software companies based in San Francisco, United States, ranked by team size, largest first. Data refreshed Sep 11, 2026. RevenueBase Smart Search rates how each company's information relates to drug discovery software companies: strong evidence (its own description names it), partial (names part of it), indirect (matched on the rest of its profile rather than the description shown). Click a contact count to view that company's people.
#CompanyRevenueBase Smart SearchHeadquartersEmployeesContacts
1Strong evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202611-5051 contacts →

Strong evidence

“AI-powered drug discovery platform for rapid molecule screening and testing, from target identification to lab validation.”

Source: RevenueBase Database · checked Sep 11, 2026
2Strong evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202611-5031 contacts →

Strong evidence

“Atomwise is a preclinical pharma company revolutionizing how drugs are discovered with AI.”

Source: RevenueBase Database · checked Sep 11, 2026
3Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202611-5025 contacts →

Indirect evidence

“We’re building the operating system for biology.”

Source: RevenueBase Database · checked Sep 11, 2026
4Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202611-5024 contacts →

Indirect evidence

“Unlocking Protein Assemblies.”

Source: RevenueBase Database · checked Sep 11, 2026
5Strong evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202611-5022 contacts →

Strong evidence

“At Atomic AI, we build artificial intelligence to pioneer new frontiers in drug discovery.”

Source: RevenueBase Database · checked Sep 11, 2026
6Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202651-20020 contacts →

Indirect evidence

“The scientific decision engine for R&D.”

Source: RevenueBase Database · checked Sep 11, 2026
7Strong evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202611-5020 contacts →

Strong evidence

“SyntheX is a biotech company advancing precision drug discovery through synthetic biology.”

Source: RevenueBase Database · checked Sep 11, 2026
8Partial evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202651-20017 contacts →

Partial evidence

“PREMIER Biosoft is a leading bioinformatics company offering software products and services to government agencies, pharmaceutical and biotechnology companies and academia across…”

Source: RevenueBase Database · checked Sep 11, 2026
9Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202611-5011 contacts →

Indirect evidence

“At we provide web interfaces and APIs for the leading publicly available molecular design tools.”

Source: RevenueBase Database · checked Sep 11, 2026
10Partial evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202611-5010 contacts →

Partial evidence

“Nexentria is a software company with mission of transforming the pharmaceutical landscape by providing innovative, cost-effective digital and AI solutions tailored to the needs of…”

Source: RevenueBase Database · checked Sep 11, 2026
11Partial evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 20261-109 contacts →

Partial evidence

“Syntensor is building software that converts large biological datasets into decisions.”

Source: RevenueBase Database · checked Sep 11, 2026
12Partial evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 20261-107 contacts →

Partial evidence

“Fee-for-service hit discovery is backwards.”

Source: RevenueBase Database · checked Sep 11, 2026
13Strong evidenceSan Francisco, United StatesHQ checked Sep 11, 20261-105 contacts →

Strong evidence

“Leap Laboratories builds software that enables the new scientific method: data-first discovery.”

Source: RevenueBase Database · checked Sep 11, 2026
14Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 20261-103 contacts →

Indirect evidence

“ExcepGen is a venture-backed, early stage biotechnology company located in San Francisco.”

Source: RevenueBase Database · checked Sep 11, 2026
15Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202611-503 contacts →

Indirect evidence

“MotionHall, part of @clarivate, helps pharma and biotech companies close more valuable licensing and M&A deals by putting a powerful professional suite of modern technology and…”

Source: RevenueBase Database · checked Sep 11, 2026
16Strong evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 20261-103 contacts →

Strong evidence

“Accelero Biostructures accelerates structure-based drug discovery and protein engineering using its Synchrotron-integrated platform for High-Throughput Protein X-ray…”

Source: RevenueBase Database · checked Sep 11, 2026
17Partial evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 20261-103 contacts →

Partial evidence

“AI-accelerated quantum chemistry for rapid drug development.”

Source: RevenueBase Database · checked Sep 11, 2026
18Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202611-502 contacts →

Indirect evidence

“Binocular Vision is a scientific informatics services company that specializes in projects spanning multiple geographies and organizations.”

Source: RevenueBase Database · checked Sep 11, 2026
19Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 11, 202611-501 contacts →

Indirect evidence

“Welcome to Viitai!”

Source: RevenueBase Database · checked Sep 11, 2026

Showing 19 of 31 drug discovery software companies based in San Francisco, United States

See the full list, filter by size, metro and specialty, and get verified emails and direct dials for all 114 reachable decision-makers.

Free signup · no credit card

View the full list →

Drug discovery software companies based in San Francisco, United States at a glance

As of Sep 11, 2026
38.8%Verified-email coverage
29.9%Mobile-number coverage
9.5Average contacts per company
11-50Median size (employees)
151.6%Largest-city concentration · San Diego
Sep 11, 2026Page data refreshed

Companies by employee count

1-10
13
11-50
15
51-200
3

Freshness & accuracy

How recently the business emails were verified and the company information checked

Email last verified

Median 12.0d

Company record updated

Median 55.0d

How this list was built

Company categories are rarely black and white. RevenueBase reads each company's own description of its business to decide whether it belongs among drug discovery software companies, so some rows will be adjacent to the category rather than pure plays. The description and RevenueBase Smart Search rating on every row are there so you can check each match yourself.

Source
The RevenueBase company graph: 60 million companies and 398.9 million professional contacts resolved from primary sources, queried with RevenueBase Smart Search, the natural-language company search available to every RevenueBase user.
What qualifies
Companies headquartered in San Francisco, United States whose own description of what they do matches “drug discovery software companies”. Matching reads each company's description, not its industry code or its name.
RevenueBase Smart Search
RevenueBase Smart Search is how this list is assembled and how each row is rated. RevenueBase's data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to a category defined in a user's own words. Each row is rated strong evidence (its own description names drug discovery software companies), partial evidence (it names part of the category) or indirect evidence (the description shown names none of it and the match rests on the rest of the company's profile). The description supporting each rating is quoted on the row.
What we exclude
Companies whose own description does not clearly place them among drug discovery software companies, and records with no verified work email. Companies headquartered outside San Francisco are excluded even when they keep an office there.
Match quality
In blind human judging of this matching method, 86% of matched companies were on target. Expect roughly 1 in 7 rows to be adjacent to the category rather than a pure play. Every row shows the company's own description and its RevenueBase Smart Search rating so you can judge each match yourself. Read the full methodology: how the lists are built, how the judging worked, and what the figure means.
Ranking
Team size, largest first: companies are ordered by the number of professionals RevenueBase tracks at each one. Employee ranges shown are reported bands, for context.
Verification
Every listed company carries at least one verified work email, 114 across the full list. Contacts re-verify on a rolling cadence, and each contact's own verification date is shown inside RevenueBase.
Refresh
This page's figures were pulled from the company graph on September 11, 2026. Lists refresh periodically as the graph is re-checked.
Corrections
Wrong category, wrong headquarters, or a company that has closed? Use “Report an issue” on any row. Reports go to the RevenueBase Data Team and feed back into the company graph.

Drug discovery software companies by metro in the United States

Frequently asked

What is RevenueBase Smart Search?

RevenueBase Smart Search is how RevenueBase decides which companies belong on this list and how strongly each one fits. Its data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to the category the list is about. Each row is rated strong evidence when the company's own description names drug discovery software companies, partial evidence when it names part of the category, and indirect evidence when the description shown names none of it and the match rests on the rest of the company's profile.

How many drug discovery software companies are there based in San Francisco, United States?

RevenueBase identified 31 drug discovery software companies headquartered in San Francisco, United States as of September 2026, matched on each company's own description of what it does rather than its industry code.

What is the largest company on this list?

OPTIC, headquartered in San Francisco, tops this list with the largest team on record.

Which city has the most drug discovery software companies?

San Diego leads with 47 headquartered companies, followed by San Francisco (37) and Boston (34).

How do I get contact information for these companies?

A free RevenueBase account lets you run this exact search and work the top results, verified emails and direct dials included. Upgrading unlocks all 114 verified decision-maker contacts tracked across these 31 companies.

How current is this list?

The list refreshes periodically as the company graph is re-checked. This page's figures were pulled on September 11, 2026.

Ready to reach these companies? Verified emails and direct dials for all 31 drug discovery software companies based in San Francisco, United States. Start with a free account, no credit card.

Download this list →

Related lists

About this data

RevenueBase is a B2B data infrastructure company. Its company graph covers 60 million companies and 398.9 million professional contacts, with emails verified on a rolling cadence rather than scraped once and left to decay. These company lists are generated directly from that graph with RevenueBase Smart Search, the same natural-language company search every RevenueBase user has: describe a market in plain words, get the companies that match, and add verified emails and direct dials for the people at them. It is the same data that powers RevenueBase's B2B data products, and a free account includes 500 credits to start. How these lists are built and judged.