Company lists · Data refreshed September 2026

Top 24 Drug discovery software companies based in Boston, United States

Name: Drug discovery software companies based in Boston, United States
Creator: RevenueBase
License: https://creativecommons.org/licenses/by/4.0/

Compiled by the RevenueBase Data Team Data refreshed Sep 11, 2026 47 companies tracked

RevenueBase identified 47 drug discovery software companies headquartered in Boston, United States as of September 2026 and tracks 1,435 professional contacts across them, including 888 with verified work emails and 579 with mobile numbers. San Diego is the largest hub.

This list covers drug discovery software companies headquartered in Boston, United States, matched on what each company actually does as described in its own words. Ranked by team size, largest first. Every row shows the company's own description, its RevenueBase Smart Search rating, and when it was last checked. Data refreshed September 11, 2026.

Published by RevenueBase, a B2B data infrastructure company. This list was built with RevenueBase Smart Search, the natural-language company search RevenueBase customers use to build their own targeted lists and unlock verified emails and direct dials at the companies on them. How these lists are built and judged.

How to read this list HQ checked on every row RevenueBase Smart Search rating on every row Refreshed Sep 11, 2026 86% judged on-target in blind review

47Companies

1,435Contacts tracked

888Verified emails

579Mobile numbers

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The 24 largest drug discovery software companies based in Boston, United States

Ranked by team size

Top 24 of 47 drug discovery software companies based in Boston, United States, ranked by team size, largest first. Data refreshed Sep 11, 2026. RevenueBase Smart Search rates how each company's information relates to drug discovery software companies: strong evidence (its own description names it), partial (names part of it), indirect (matched on the rest of its profile rather than the description shown). Click a contact count to view that company's people.
#	Company	RevenueBase Smart Search	Headquarters	Employees	Contacts
1	Dotmatics	Partial evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	501-1,000	405 contacts →
	Partial evidence “Dotmatics is the global leader in R&D scientific software that connects science, data, and decision-making.” Source: RevenueBase Database · checked Sep 11, 2026
2	Nimbus Therapeutics	Strong evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	51-200	102 contacts →
	Strong evidence “Nimbus Therapeutics is a clinical-stage, structure-based drug discovery company developing novel small molecule medicines designed to act against well-validated but…” Source: RevenueBase Database · checked Sep 11, 2026
3	Metrum Research Group	Indirect evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	51-200	93 contacts →
	Indirect evidence “Metrum Research Group, established in 2004, is a global leader in biomedical modeling and simulation.” Source: RevenueBase Database · checked Sep 11, 2026
4	Jnana Therapeutics	Partial evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	51-200	91 contacts →
	Partial evidence “Jnana Therapeutics is a clinical-stage biotechnology company leveraging its next-generation chemoproteomics RAPID platform to discover medicines for highly validated…” Source: RevenueBase Database · checked Sep 11, 2026
5	Protein Metrics, LLC	Partial evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	51-200	59 contacts →
	Partial evidence “Protein Metrics' vendor-neutral software allows scientists to use data generated on analytical instruments like mass spectrometers to quickly identify and report protein sequences…” Source: RevenueBase Database · checked Sep 11, 2026
6	Manifold BIO	Partial evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	11-50	55 contacts →
	Partial evidence “Manifold Bio is a platform therapeutics company building the first AI-guided direct-to-vivo discovery platform.” Source: RevenueBase Database · checked Sep 11, 2026
7	Quris AI	Partial evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	11-50	50 contacts →
	Partial evidence “Quris-AI is an artificial intelligence innovator that is disrupting drug development.” Source: RevenueBase Database · checked Sep 11, 2026
8	Seven Bridges	Indirect evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	201-500	46 contacts →
	Indirect evidence “Seven Bridges is the industry-leading unified bioinformatics solutions company accelerating precision medicine by enabling the understanding of biomedical data.” Source: RevenueBase Database · checked Sep 11, 2026
9	Superluminal Medicines INC	Indirect evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	11-50	44 contacts →
	Indirect evidence “Superluminal Medicines is a Boston-based generative biology and chemistry company developing a differentiated pipeline and revolutionizing the speed and accuracy of how medicine…” Source: RevenueBase Database · checked Sep 11, 2026
10	AI Proteins	Indirect evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	11-50	39 contacts →
	Indirect evidence “Boston-based AI Proteins is a biotech company on a mission to re-imagine protein therapeutics with a novel approach for designing entirely new proteins.” Source: RevenueBase Database · checked Sep 11, 2026
11	Dash BIO	Partial evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	11-50	26 contacts →
	Partial evidence “At Dash Bio, we're revolutionizing bioanalysis to expedite drug development.” Source: RevenueBase Database · checked Sep 11, 2026
12	Vivtex	Partial evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	11-50	23 contacts →
	Partial evidence “Vivtex originated from MIT, with a mission to enable the development of new oral drugs using sophisticated high throughput screening technologies, IP protected formulation…” Source: RevenueBase Database · checked Sep 11, 2026
13	Qsimulate	Strong evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	11-50	22 contacts →
	Strong evidence “QSimulate is reshaping the Future of Computational Drug Discovery by providing revolutionary quantum-powered simulation solutions that reduce R&D timelines and increase the…” Source: RevenueBase Database · checked Sep 11, 2026
14	Psivant Therapeutics	Partial evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	11-50	18 contacts →
	Partial evidence “Psivant Therapeutics is advancing a paradigm shift in biotechnology by pioneering a physics-driven approach to drug design that is tightly coupled to chemistry and biology…” Source: RevenueBase Database · checked Sep 11, 2026
15	D-Wise	Indirect evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	51-200	18 contacts →
	Indirect evidence “We help Pharmaceutical, Biotech, Contract Research Organizations, and Medical Device companies navigate technology change in pursuit of human health and wellbeing.” Source: RevenueBase Database · checked Sep 11, 2026
16	ARK	Indirect evidence	Boston, United StatesHQ checked Sep 11, 2026	11-50	16 contacts →
	Indirect evidence “With an intelligent bioprocess platform, Ark helps today’s innovators make better decisions and accelerate development timelines dramatically, to bring transformational science…” Source: RevenueBase Database · checked Sep 11, 2026
17	Animol Discovery, INC	Strong evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	11-50	14 contacts →
	Strong evidence “Animol is a drug discovery company that leverages the powerful combination of machine learning and DNA-encoded chemical libraries to build a proprietary pipeline of highly…” Source: RevenueBase Database · checked Sep 11, 2026
18	Diamond AGE Data Science	Indirect evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	1-10	12 contacts →
	Indirect evidence “Diamond Age Data Science is an integrated bioinformatics and computational biology partner for life science companies.” Source: RevenueBase Database · checked Sep 11, 2026
19	Bridge Informatics	Partial evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	11-50	12 contacts →
	Partial evidence “We provide software solutions and professional services to help life science companies translate data into biological results.” Source: RevenueBase Database · checked Sep 11, 2026
20	SEP	Strong evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	1-10	11 contacts →
	Strong evidence “SEP provides high quality, consolidated preclinical drug discovery and development solutions for pharmaceutical, biotechnology, and cosmetic/consumer care companies.” Source: RevenueBase Database · checked Sep 11, 2026
21	1910 Genetics	Strong evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	11-50	10 contacts →
	Strong evidence “1910 Genetics is the only biotechnology company advancing small and large molecule drug discovery with a multimodal AI platform powered by laboratory automation.” Source: RevenueBase Database · checked Sep 11, 2026
22	Vibe BIO	Partial evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	1-10	4 contacts →
	Partial evidence “An AI software company with a venture capital arm, our mission at Vibe Bio is to find every cure for every community.” Source: RevenueBase Database · checked Sep 11, 2026
23	Akttyva Therapeutics	Indirect evidence	Boston, MA, United StatesHQ checked Sep 11, 2026	1-10	4 contacts →
	Indirect evidence “Akttyva Therapeutics, Inc.” Source: RevenueBase Database · checked Sep 11, 2026
24	Wild Biotech	Strong evidence	Boston, United StatesHQ checked Sep 11, 2026	1-10	3 contacts →
	Strong evidence “We are a drug discovery platform company” Source: RevenueBase Database · checked Sep 11, 2026

RevenueBase Smart Search

RevenueBase Smart Search assesses information from a company’s LinkedIn profile, information supplied directly by the company, its website, and other publicly available sources. It uses that information to rate how closely the company relates to this list’s category: drug discovery software companies. Every row carries its rating and the description the rating was read from, so each one can be checked rather than taken on trust.

Strong evidence: The company's own public description of its business names drug discovery software companies.
Partial evidence: Its own public description names part of drug discovery software companies, so it works in or next to the category without describing itself that way.
Indirect evidence: The description shown does not name drug discovery software companies. The match rests on the rest of the company's public profile rather than the one sentence quoted here, so this is the rating to check first.

RevenueBase Smart Search is how these lists are built: RevenueBase's data engine and AI assemble the companies that match a category defined in a user's own words, so a list can be about what companies actually do rather than about whichever industry code they were filed under.

Showing 24 of 47 drug discovery software companies based in Boston, United States

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Drug discovery software companies based in Boston, United States at a glance

As of Sep 11, 2026

61.9%Verified-email coverage

40.3%Mobile-number coverage

30.5Average contacts per company

11-50Median size (employees)

100.0%Largest-city concentration · San Diego

Sep 11, 2026Page data refreshed

Companies by employee count

1-10

11-50

51-200

201-500

501-1,000

Freshness & accuracy

How recently the business emails were verified and the company information checked

Email last verified

Median 13.0d

8170–30

6631–60

061–90

390–180

2180+

Company record updated

Median 50.0d

00–30

87431–60

39161–90

9690–180

74180+

How this list was built

Company categories are rarely black and white. RevenueBase reads each company's own description of its business to decide whether it belongs among drug discovery software companies, so some rows will be adjacent to the category rather than pure plays. The description and RevenueBase Smart Search rating on every row are there so you can check each match yourself.

Source: The RevenueBase company graph: 60 million companies and 398.9 million professional contacts resolved from primary sources, queried with RevenueBase Smart Search, the natural-language company search available to every RevenueBase user.
What qualifies: Companies headquartered in Boston, United States whose own description of what they do matches “drug discovery software companies”. Matching reads each company's description, not its industry code or its name.
RevenueBase Smart Search: RevenueBase Smart Search is how this list is assembled and how each row is rated. RevenueBase's data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to a category defined in a user's own words. Each row is rated strong evidence (its own description names drug discovery software companies), partial evidence (it names part of the category) or indirect evidence (the description shown names none of it and the match rests on the rest of the company's profile). The description supporting each rating is quoted on the row.
What we exclude: Companies whose own description does not clearly place them among drug discovery software companies, and records with no verified work email. Companies headquartered outside Boston are excluded even when they keep an office there.
Match quality: In blind human judging of this matching method, 86% of matched companies were on target. Expect roughly 1 in 7 rows to be adjacent to the category rather than a pure play. Every row shows the company's own description and its RevenueBase Smart Search rating so you can judge each match yourself. Read the full methodology: how the lists are built, how the judging worked, and what the figure means.
Ranking: Team size, largest first: companies are ordered by the number of professionals RevenueBase tracks at each one. Employee ranges shown are reported bands, for context.
Verification: Every listed company carries at least one verified work email, 888 across the full list. Contacts re-verify on a rolling cadence, and each contact's own verification date is shown inside RevenueBase.
Refresh: This page's figures were pulled from the company graph on September 11, 2026. Lists refresh periodically as the graph is re-checked.
Corrections: Wrong category, wrong headquarters, or a company that has closed? Use “Report an issue” on any row. Reports go to the RevenueBase Data Team and feed back into the company graph.

Drug discovery software companies by metro in the United States

Drug discovery software companies in San Diego47
Drug discovery software companies in San Francisco37
Drug discovery software companies in Boston34
Drug discovery software companies in Cambridge26

Frequently asked

What is RevenueBase Smart Search?

RevenueBase Smart Search is how RevenueBase decides which companies belong on this list and how strongly each one fits. Its data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to the category the list is about. Each row is rated strong evidence when the company's own description names drug discovery software companies, partial evidence when it names part of the category, and indirect evidence when the description shown names none of it and the match rests on the rest of the company's profile.

How many drug discovery software companies are there based in Boston, United States?

RevenueBase identified 47 drug discovery software companies headquartered in Boston, United States as of September 2026, matched on each company's own description of what it does rather than its industry code.

What is the largest company on this list?

Dotmatics, headquartered in Boston, tops this list with the largest team on record.

Which city has the most drug discovery software companies?

San Diego leads with 47 headquartered companies, followed by San Francisco (37) and Boston (34).

How do I get contact information for these companies?

A free RevenueBase account lets you run this exact search and work the top results, verified emails and direct dials included. Upgrading unlocks all 888 verified decision-maker contacts tracked across these 47 companies.

How current is this list?

The list refreshes periodically as the company graph is re-checked. This page's figures were pulled on September 11, 2026.

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About this data

RevenueBase is a B2B data infrastructure company. Its company graph covers 60 million companies and 398.9 million professional contacts, with emails verified on a rolling cadence rather than scraped once and left to decay. These company lists are generated directly from that graph with RevenueBase Smart Search, the same natural-language company search every RevenueBase user has: describe a market in plain words, get the companies that match, and add verified emails and direct dials for the people at them. It is the same data that powers RevenueBase's B2B data products, and a free account includes 500 credits to start. How these lists are built and judged.