Company lists · Data refreshed September 2026

Top 25 Bioinformatics companies based in San Francisco, United States

This directory lists 56 bioinformatics companies based in San Francisco, United States, with 656 business contacts and 259 email addresses. As of September 2026, San Diego is the single most-represented city among the companies listed.

Bioinformatics companies develop software, databases, computational tools, and services for analyzing biological and biomedical data. This list covers companies that provide bioinformatics software, databases, computational analysis, data services, or related tools for biological and biomedical research. Ranked by team size, largest first. Data current as of September 7, 2026.

Published by RevenueBase, a B2B data infrastructure company. This list was built with RevenueBase Smart Search, the natural-language company search RevenueBase customers use to build their own targeted lists and unlock verified emails and direct dials at the companies on them. How these lists are built and judged.

How to read this list HQ checked on every row RevenueBase Smart Search rating on every row Refreshed Sep 7, 2026 86% judged on-target in blind review
56Companies
656Contacts tracked
259Verified emails
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The 25 largest bioinformatics companies based in San Francisco, United States

Ranked by team size
Top 25 of 56 bioinformatics companies based in San Francisco, United States, ranked by team size, largest first. Data refreshed Sep 7, 2026. RevenueBase Smart Search rates how each company's information relates to bioinformatics companies: strong evidence (its own description names it), partial (names part of it), indirect (matched on the rest of its profile rather than the description shown). Click a contact count to view that company's people.
#CompanyRevenueBase Smart SearchHeadquartersEmployeesContacts
1Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202651-200196 contacts →

“Recognized as the 'Most Innovative Biotech Company, 2024', by Fast Company!”

Source: company website · checked Sep 7, 2026
2Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202651-20055 contacts →

“Brightseed is a pioneer in biosciences and artificial intelligence (A.I.) that illuminates nature to restore human health.”

Source: company website · checked Sep 7, 2026
3Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-5051 contacts →

“AI-powered drug discovery platform for rapid molecule screening and testing, from target identification to lab validation.”

Source: company website · checked Sep 7, 2026
4Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-5037 contacts →

“Verge Labs is a frontier AI lab building world models of human disease biology.”

Source: company website · checked Sep 7, 2026
5Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-5031 contacts →

“Atomwise is a preclinical pharma company revolutionizing how drugs are discovered with AI.”

Source: company website · checked Sep 7, 2026
6Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202651-20026 contacts →

“Agent infrastructure for biology.”

Source: company website · checked Sep 7, 2026
7Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-5025 contacts →

“We’re building the operating system for biology.”

Source: company website · checked Sep 7, 2026
8Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-5022 contacts →

“At Atomic AI, we build artificial intelligence to pioneer new frontiers in drug discovery.”

Source: company website · checked Sep 7, 2026
9Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-5020 contacts →

“SyntheX is a biotech company advancing precision drug discovery through synthetic biology.”

Source: company website · checked Sep 7, 2026
10Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-5019 contacts →

“SciGenom was founded in 2010 by Sam Santhosh with the goal of enabling genomics in India.”

Source: company website · checked Sep 7, 2026
11Strong evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202651-20017 contacts →

“PREMIER Biosoft is a leading bioinformatics company offering software products and services to government agencies, pharmaceutical and biotechnology companies and academia across…”

Source: company website · checked Sep 7, 2026
12Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-5011 contacts →

“At we provide web interfaces and APIs for the leading publicly available molecular design tools.”

Source: company website · checked Sep 7, 2026
13Strong evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-5010 contacts →

“One Codex is the leading bioinformatics platform for microbial genomics, supporting taxonomic and functional analysis of metagenomic (WGS), 16S, and other sequencing data.”

Source: company website · checked Sep 7, 2026
14Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 20261-109 contacts →

“Syntensor is building software that converts large biological datasets into decisions.”

Source: company website · checked Sep 7, 2026
15Indirect evidenceSan Francisco, United StatesHQ checked Sep 7, 20261-109 contacts →

“Golgi is redefining computational proteomics.”

Source: company website · checked Sep 7, 2026
16Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 20261-107 contacts →

“Datum is a pharma and biomedical knowledge platform for healthcare application and research, with initial focus on building trustworthy and reliable AI for precision medicine and…”

Source: company website · checked Sep 7, 2026
17Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 20261-107 contacts →

“At BioGlyph, we empower the scientists to push the boundaries of what is possible with a format agnostic platform.”

Source: company website · checked Sep 7, 2026
18Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 20261-104 contacts →

“Avail Bio is a venture-backed genomic biotechnology company in San Francisco, CA.”

Source: company website · checked Sep 7, 2026
19Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 20261-104 contacts →

“NGX Bio is a platform for executing next-generation sequencing projects.”

Source: company website · checked Sep 7, 2026
20Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-503 contacts →

“MotionHall, part of @clarivate, helps pharma and biotech companies close more valuable licensing and M&A deals by putting a powerful professional suite of modern technology and…”

Source: company website · checked Sep 7, 2026
21Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-502 contacts →

“Databiology is a privately held global life sciences software and services company based in the US, UK, Hong Kong, and Mexico.”

Source: company website · checked Sep 7, 2026
22Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 20261-102 contacts →

“We build genomics software that is a joy to use.”

Source: company website · checked Sep 7, 2026
23Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-502 contacts →

“Binocular Vision is a scientific informatics services company that specializes in projects spanning multiple geographies and organizations.”

Source: company website · checked Sep 7, 2026
24Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 20261-102 contacts →

“The company mission is to empower clinicians and physicians everywhere with the genetic data about their patient; enabling them to make informed therapy decisions faster.”

Source: company website · checked Sep 7, 2026
25Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 7, 202611-501 contacts →

“Welcome to Viitai!”

Source: company website · checked Sep 7, 2026

Showing 25 of 56 bioinformatics companies based in San Francisco, United States

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Bioinformatics companies based in San Francisco, United States at a glance

As of Sep 7, 2026
39.5%Verified-email coverage
11.7Average contacts per company
1-10Median size (employees)
183.9%Largest-city concentration · San Diego
Sep 7, 2026Page data refreshed

Companies by employee count

1-10
34
11-50
17
51-200
5

Email recency for this list is measured across the whole United States list rather than this city, so it is reported there. Company counts and contact totals on this page are exact for San Francisco, over 56 companies.

How this list was built

Company categories are rarely black and white. RevenueBase reads each company's own description of its business to decide whether it belongs among bioinformatics companies, so some rows will be adjacent to the category rather than pure plays. The description and RevenueBase Smart Search rating on every row are there so you can check each match yourself.

Source
The RevenueBase company graph: 60 million companies and 398.9 million professional contacts resolved from primary sources, queried with RevenueBase Smart Search, the natural-language company search available to every RevenueBase user.
What qualifies
Companies headquartered in San Francisco, United States whose own description of what they do matches “bioinformatics companies”. Matching reads each company's description, not its industry code or its name.
RevenueBase Smart Search
RevenueBase Smart Search is how this list is assembled and how each row is rated. RevenueBase's data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to a category defined in a user's own words. Each row is rated strong evidence (its own description names bioinformatics companies), partial evidence (it names part of the category) or indirect evidence (the description shown names none of it and the match rests on the rest of the company's profile). The description supporting each rating is quoted on the row.
What we exclude
Companies whose own description does not clearly place them among bioinformatics companies, and records with no verified work email. Companies headquartered outside San Francisco are excluded even when they keep an office there.
Match quality
In blind human judging of this matching method, 86% of matched companies were on target. Expect roughly 1 in 7 rows to be adjacent to the category rather than a pure play. Every row shows the company's own description and its RevenueBase Smart Search rating so you can judge each match yourself. Read the full methodology: how the lists are built, how the judging worked, and what the figure means.
Ranking
Team size, largest first: companies are ordered by the number of professionals RevenueBase tracks at each one. Employee ranges shown are reported bands, for context.
Verification
Every listed company carries at least one verified work email, 259 across the full list. Contacts re-verify on a rolling cadence, and each contact's own verification date is shown inside RevenueBase.
Refresh
This page's figures were pulled from the company graph on September 7, 2026. Lists refresh periodically as the graph is re-checked.
Corrections
Wrong category, wrong headquarters, or a company that has closed? Use “Report an issue” on any row. Reports go to the RevenueBase Data Team and feed back into the company graph.

Frequently asked

How many bioinformatics companies are in the directory?

The directory contains 56 bioinformatics companies based in San Francisco, United States as of September 2026.

What do bioinformatics companies do?

Bioinformatics companies provide computational tools, software, databases, and services for organizing and analyzing biological and biomedical data.

Which city has the most bioinformatics companies?

San Diego is the single most-represented city among the bioinformatics companies in this directory.

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About this data

RevenueBase is a B2B data infrastructure company. Its company graph covers 60 million companies and 398.9 million professional contacts, with emails verified on a rolling cadence rather than scraped once and left to decay. These company lists are generated directly from that graph with RevenueBase Smart Search, the same natural-language company search every RevenueBase user has: describe a market in plain words, get the companies that match, and add verified emails and direct dials for the people at them. It is the same data that powers RevenueBase's B2B data products, and a free account includes 500 credits to start. How these lists are built and judged.