Company lists · Data refreshed September 2026

Top 25 Variant calling software providers based in the United States

RevenueBase identified 102 variant calling software providers headquartered in the United States as of September 2026 and tracks 2,659 professional contacts across them, including 1,627 with verified work emails and 1,088 with mobile numbers. San Francisco is the largest hub.

This list covers variant calling software providers headquartered in the United States, matched on what each company actually does as described in its own words. Ranked by team size, largest first. Every row shows the company's own description, its RevenueBase Smart Search rating, and when it was last checked. Data refreshed September 6, 2026.

Published by RevenueBase, a B2B data infrastructure company. This list was built with RevenueBase Smart Search, the natural-language company search RevenueBase customers use to build their own targeted lists and unlock verified emails and direct dials at the companies on them. How these lists are built and judged.

How to read this list HQ checked on every row RevenueBase Smart Search rating on every row Refreshed Sep 6, 2026 86% judged on-target in blind review
102Companies
2,659Contacts tracked
1,627Verified emails
1,088Mobile numbers
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The 25 largest variant calling software providers based in the United States

Ranked by team size
Top 25 of 102 variant calling software providers based in the United States, ranked by team size, largest first. Data refreshed Sep 6, 2026. RevenueBase Smart Search rates how each company's information relates to variant calling software providers: strong evidence (its own description names it), partial (names part of it), indirect (matched on the rest of its profile rather than the description shown). Click a contact count to view that company's people.
#CompanyRevenueBase Smart SearchHeadquartersEmployeesContacts
1Indirect evidenceMenlo Park, CA, United StatesHQ checked Sep 6, 2026501-1,000636 contacts →

“At PacBio, we’re devoted to empowering you.”

Source: company website · checked Sep 6, 2026
2Indirect evidenceCharlestown, MA, United StatesHQ checked Sep 6, 2026501-1,000369 contacts →

“Velsera was formed in 2023 through the shared vision of Seven Bridges and Pierian, with a mission to accelerate the discovery, development, and delivery of life-changing insights.”

Source: company website · checked Sep 6, 2026
3Indirect evidenceBoulder, CO, United StatesHQ checked Sep 6, 202651-200228 contacts →

“Watchmaker Genomics is a biotechnology company that specializes in advanced enzymology to develop precision tools for life sciences.”

Source: company website · checked Sep 6, 2026
4Indirect evidenceSan Diego, CA, United StatesHQ checked Sep 6, 202651-200135 contacts →

“Agena Bioscience® empowers research laboratories worldwide to deliver scalable targeted genomic data.”

Source: company website · checked Sep 6, 2026
5Indirect evidenceSan Diego, CA, United StatesHQ checked Sep 6, 202651-20078 contacts →

“BioTuring is an innovative bioinformatics company based in San Diego.”

Source: company website · checked Sep 6, 2026
6Indirect evidenceNatick, MA, United StatesHQ checked Sep 6, 202651-20071 contacts →

“Pillar Biosciences is a global innovator in next-generation sequencing (NGS), focused on delivering kitted NGS solutions designed for robust analytical performance and operational…”

Source: company website · checked Sep 6, 2026
7Partial evidenceBoston, MA, United StatesHQ checked Sep 6, 202651-20059 contacts →

“Protein Metrics' vendor-neutral software allows scientists to use data generated on analytical instruments like mass spectrometers to quickly identify and report protein sequences…”

Source: company website · checked Sep 6, 2026
8Partial evidenceMadison, WI, United StatesHQ checked Sep 6, 202651-20050 contacts →

“Genome International is a Bio-IT company that provides innovative software products and services in clinical genomics and Information Technology.”

Source: company website · checked Sep 6, 2026
9Indirect evidenceNew York, United StatesHQ checked Sep 6, 202651-20048 contacts →

“Igentify® is a digital health company.”

Source: company website · checked Sep 6, 2026
10Indirect evidencePalo Alto, CA, United StatesHQ checked Sep 6, 202651-20045 contacts →

“Centrillion Tech’ mission is to empower researchers, physicians and consumers to have responsible and cost effective access to genomic information and to advance personalized…”

Source: company website · checked Sep 6, 2026
11Indirect evidenceCambridge, MA, United StatesHQ checked Sep 6, 202611-5045 contacts →

“Ovation is a leading provider of genomic data for the life sciences industry.”

Source: company website · checked Sep 6, 2026
12Indirect evidenceSunrise, FL, United StatesHQ checked Sep 6, 202611-5039 contacts →

“Every diagnosis begins with a question.”

Source: company website · checked Sep 6, 2026
13Partial evidenceAnn Arbor, MI, United StatesHQ checked Sep 6, 202611-5032 contacts →

“Gene Codes Corporation is an international software firm specializing in bioinformatics software for DNA sequence analysis.”

Source: company website · checked Sep 6, 2026
14Indirect evidenceBozeman, MT, United StatesHQ checked Sep 6, 202611-5028 contacts →

“Golden Helix has been delivering industry-leading bioinformatics solutions for the advancement of life science research and translational medicine for over 20 years.”

Source: company website · checked Sep 6, 2026
15Indirect evidenceCarlsbad, CA, United StatesHQ checked Sep 6, 202651-20027 contacts →

“ChromaCode is a molecular diagnostics company with a bioinformatics focus and pedigree from Illumina, Google[x], Luminex, and Caltech.”

Source: company website · checked Sep 6, 2026
16Indirect evidenceNew York City, NY, United StatesHQ checked Sep 6, 202611-5025 contacts →

“Basepair is a next generation bioinformatics company.”

Source: company website · checked Sep 6, 2026
17Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 6, 202611-5025 contacts →

“We’re building the operating system for biology.”

Source: company website · checked Sep 6, 2026
18Partial evidenceSeattle, WA, United StatesHQ checked Sep 6, 202651-20022 contacts →

“TwinStrand Biosciences Duplex Sequencing patent estate is the foundational technology enabling the ability to accurately identify ultra-low frequency genomic variants that are…”

Source: company website · checked Sep 6, 2026
19Indirect evidenceSan Diego, United StatesHQ checked Sep 6, 202611-5019 contacts →

“Alida Biosciences is developing the next generation of RNA analysis tools to enable new medical treatments and diagnostic assays.”

Source: company website · checked Sep 6, 2026
20Indirect evidenceSeattle, WA, United StatesHQ checked Sep 6, 202611-5019 contacts →

“Phase Genomics helps scientists solve today’s most pressing health and environmental challenges.”

Source: company website · checked Sep 6, 2026
21Indirect evidenceBoston, MA, United StatesHQ checked Sep 6, 202651-20017 contacts →

“Genuity Science is a wholly-owned subsidiary of US biotechnology company, HiberCell.”

Source: company website · checked Sep 6, 2026
22Indirect evidenceMurrieta, CA, United StatesHQ checked Sep 6, 20261-1017 contacts →

“Intelliseq is a genomics company turning complex DNA data into clear, actionable insights.”

Source: company website · checked Sep 6, 2026
23Partial evidenceSan Francisco, CA, United StatesHQ checked Sep 6, 202651-20017 contacts →

“PREMIER Biosoft is a leading bioinformatics company offering software products and services to government agencies, pharmaceutical and biotechnology companies and academia across…”

Source: company website · checked Sep 6, 2026
24Indirect evidenceEl Segundo, CA, United StatesHQ checked Sep 6, 2026201-50016 contacts →

“BioDiscovery, Inc.”

Source: company website · checked Sep 6, 2026
25Indirect evidenceBeverly, MA, United StatesHQ checked Sep 6, 202611-5014 contacts →

“Sage Science products are built on the idea that science is more robust and reliable when it is based on high-precision, automated, reproducible technology instead of manually…”

Source: company website · checked Sep 6, 2026

Showing 25 of 102 variant calling software providers based in the United States

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Variant calling software providers based in the United States at a glance

As of Sep 6, 2026
61.2%Verified-email coverage
40.9%Mobile-number coverage
26.1Average contacts per company
11-50Median size (employees)
6.9%Largest-city concentration · San Francisco
Sep 6, 2026Page data refreshed

Companies by employee count

1-10
46
11-50
34
51-200
17
201-500
3
501-1,000
2

Freshness & accuracy

How recently the business emails on this list were verified

Email last verified

How this list was built

Company categories are rarely black and white. RevenueBase reads each company's own description of its business to decide whether it belongs among variant calling software providers, so some rows will be adjacent to the category rather than pure plays. The description and RevenueBase Smart Search rating on every row are there so you can check each match yourself.

Source
The RevenueBase company graph: 60 million companies and 398.9 million professional contacts resolved from primary sources, queried with RevenueBase Smart Search, the natural-language company search available to every RevenueBase user.
What qualifies
Companies headquartered in the United States whose own description of what they do matches “variant calling software providers”. Matching reads each company's description, not its industry code or its name.
RevenueBase Smart Search
RevenueBase Smart Search is how this list is assembled and how each row is rated. RevenueBase's data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to a category defined in a user's own words. Each row is rated strong evidence (its own description names variant calling software providers), partial evidence (it names part of the category) or indirect evidence (the description shown names none of it and the match rests on the rest of the company's profile). The description supporting each rating is quoted on the row.
What we exclude
Companies whose own description does not clearly place them among variant calling software providers, and records with no verified work email. Companies headquartered outside United States are excluded even when they keep an office there.
Match quality
In blind human judging of this matching method, 86% of matched companies were on target. Expect roughly 1 in 7 rows to be adjacent to the category rather than a pure play. Every row shows the company's own description and its RevenueBase Smart Search rating so you can judge each match yourself. Read the full methodology: how the lists are built, how the judging worked, and what the figure means.
Ranking
Team size, largest first: companies are ordered by the number of professionals RevenueBase tracks at each one. Employee ranges shown are reported bands, for context.
Verification
Every listed company carries at least one verified work email, 1,627 across the full list. Contacts re-verify on a rolling cadence, and each contact's own verification date is shown inside RevenueBase.
Refresh
This page's figures were pulled from the company graph on September 6, 2026. Lists refresh periodically as the graph is re-checked.
Corrections
Wrong category, wrong headquarters, or a company that has closed? Use “Report an issue” on any row. Reports go to the RevenueBase Data Team and feed back into the company graph.

Frequently asked

What is RevenueBase Smart Search?

RevenueBase Smart Search is how RevenueBase decides which companies belong on this list and how strongly each one fits. Its data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to the category the list is about. Each row is rated strong evidence when the company's own description names variant calling software providers, partial evidence when it names part of the category, and indirect evidence when the description shown names none of it and the match rests on the rest of the company's profile.

How many variant calling software providers are there based in the United States?

RevenueBase identified 102 variant calling software providers headquartered in the United States as of September 2026, matched on each company's own description of what it does rather than its industry code.

What is the largest company on this list?

Pacbio, headquartered in Menlo Park, tops this list with the largest team on record.

Which city has the most variant calling software providers?

San Francisco leads with 7 headquartered companies, followed by San Diego (6) and Boston (3).

How do I get contact information for these companies?

A free RevenueBase account lets you run this exact search and work the top results, verified emails and direct dials included. Upgrading unlocks all 1,627 verified decision-maker contacts tracked across these 102 companies.

How current is this list?

The list refreshes periodically as the company graph is re-checked. This page's figures were pulled on September 6, 2026.

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About this data

RevenueBase is a B2B data infrastructure company. Its company graph covers 60 million companies and 398.9 million professional contacts, with emails verified on a rolling cadence rather than scraped once and left to decay. These company lists are generated directly from that graph with RevenueBase Smart Search, the same natural-language company search every RevenueBase user has: describe a market in plain words, get the companies that match, and add verified emails and direct dials for the people at them. It is the same data that powers RevenueBase's B2B data products, and a free account includes 500 credits to start. How these lists are built and judged.