Company lists · Data refreshed September 2026

Top 23 Protein structure prediction software companies based in the United States

RevenueBase identified 55 company matches for protein structure prediction software companies associated with the United States as of September 2026 and tracks 3,138 professional contacts across them, including 2,121 with verified work emails. New York is the largest hub.

This list covers company matches for protein structure prediction software companies associated with the United States, found by RevenueBase SmartSearch using the meaning of business descriptions in its company graph at Exact. Ranked by professionals tracked, largest first. Rows show recorded descriptions where available, Exact search membership and the snapshot date. Data refreshed September 29, 2026.

Published by RevenueBase, a B2B data infrastructure company. This list was built with RevenueBase SmartSearch, the natural-language company search RevenueBase customers use to build their own targeted lists and unlock verified emails and direct dials at the companies on them. How these lists are built and judged.

How to read this list RevenueBase SmartSearch · Exact Recorded Sep 29, 2026 How this list was built
55Companies
3,138Contacts tracked
2,121Verified emails
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The 23 largest protein structure prediction software companies based in the United States

Ranked by team size
Top 23 of 55 company matches for protein structure prediction software companies based in the United States, ordered by professional contacts tracked in RevenueBase, largest first. Recorded Sep 29, 2026. The RevenueBase SmartSearch column shows Exact match membership in this saved search. Click a contact count to view that company's people. Totals use company locations recorded by RevenueBase; the displayed preview is a smaller selection.
#CompanyRevenueBase SmartSearchHeadquartersEmployeesContacts
1Exact matchRadnor, PA, United StatesHQ recorded Sep 29, 20261,001-5,0001,237 contacts →

Exact match

“Certara accelerates medicines using proprietary biosimulation software, technology and services to transform traditional drug discovery and development.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
2Exact matchNew York, NY, United StatesHQ recorded Sep 29, 2026501-1,000957 contacts →

Exact match

“Schrödinger’s industry-leading computational platform facilitates the research efforts of biopharmaceutical and industrial companies, academic institutions, and government…”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
3Exact matchNew York, NY, United StatesHQ recorded Sep 29, 202651-200149 contacts →

Exact match

“D.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
4Exact matchSanta Fe, NM, United StatesHQ recorded Sep 29, 202651-200121 contacts →

Exact match

“OpenEye, Cadence Molecular Sciences is an industry leader in computational molecular design based on decades of delivering rapid, robust, and scalable software, toolkits, and…”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
5Exact matchNew York, NY, United StatesHQ recorded Sep 29, 202651-20070 contacts →

Exact match

“NYSBC is a global leader in structural biology with unsurpassed instrumentation and expertise, providing biomedical research services to commercial and academic clients, including…”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
6Exact matchBrooklyn, United StatesHQ recorded Sep 29, 202611-5035 contacts →

Exact match

“Overview: AccutarBio employs artificial intelligence to revolutionize drug discovery.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
7Exact matchSan Francisco, CA, United StatesHQ recorded Sep 29, 202611-5031 contacts →

Exact match

“Atomwise is a preclinical pharma company revolutionizing how drugs are discovered with AI.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
8Exact matchSan Diego, CA, United StatesHQ recorded Sep 29, 202611-5028 contacts →

Exact match

“Nanome is the ultimate interface for scientific discovery, starting with molecular data.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
9Exact matchMadison, WI, United StatesHQ recorded Sep 29, 202611-5026 contacts →

Exact match

“DNASTAR is a global software company that has been meeting the needs of life scientists for over 40 years by providing innovative and easy-to-use desktop software tools for…”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
10Exact matchCambridge, MA, United StatesHQ recorded Sep 29, 202611-5025 contacts →

Exact match

“MetaCell is a life science-focused software company composed of scientists and software engineers with deep domain expertise in computational neuroscience, molecular biology, data…”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
11Exact matchHillsborough, NJ, United StatesHQ recorded Sep 29, 202611-5020 contacts →

Exact match

“DeltaSoft has been providing scientific software and expert services for research companies since 1996.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
12Exact matchLos Angeles, CA, United StatesHQ recorded Sep 29, 20261-1015 contacts →

Exact match

“Pythialabs is an innovative technology start-up based in Los Angeles that aims to develop cutting-edge solutions for the biotechnology industry.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
13Exact matchHalf Moon Bay, CA, United StatesHQ recorded Sep 29, 202611-5015 contacts →

Exact match

“GenNext® Technologies offers advanced instrumentation and contract services for rapid insights into the higher order structure, interactions, folding, aggregation, formulation…”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
14Exact matchSan Francisco, CA, United StatesHQ recorded Sep 29, 202611-5011 contacts →

Exact match

“At we provide web interfaces and APIs for the leading publicly available molecular design tools.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
15Exact matchDoylestown, PA, United StatesHQ recorded Sep 29, 20261-1011 contacts →

Exact match

“The mission of Conifer Point is to be the premier provider of web-based, drug design tools so that researchers can access rigorous molecular modeling in user friendly format.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
16Exact matchBerkeley, CA, United StatesHQ recorded Sep 29, 202611-509 contacts →

Exact match

“We’ve created the gold standard software to predictively model molecular interactions.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
17Exact matchSan Francisco, United StatesHQ recorded Sep 29, 20261-106 contacts →

Exact match

“Building the world’s largest atlas of engineered protein interaction data.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
18Exact matchCambridge, MA, United StatesHQ recorded Sep 29, 20261-106 contacts →

Exact match

“Building genomic intelligence”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
19Exact matchGermantown, MD, United StatesHQ recorded Sep 29, 20261-104 contacts →

Exact match

“VERACHEM LLC is a biotechnology company based out of P.O.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
20Exact matchBaltimore, MD, United StatesHQ recorded Sep 29, 20261-104 contacts →

Exact match

“SilcsBio provides software and services for unlocking the full potential of computer driven drug design.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
21Exact matchSan Francisco, CA, United StatesHQ recorded Sep 29, 20261-103 contacts →

Exact match

“Accelero Biostructures accelerates structure-based drug discovery and protein engineering using its Synchrotron-integrated platform for High-Throughput Protein X-ray…”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
22Exact matchAlbuquerque, NM, United StatesHQ recorded Sep 29, 20261-102 contacts →

Exact match

“Advance your group's research mission and catalyze breakthroughs by utilizing RDG's scientists' expertise in macromolecular modeling on demand.”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase
23Exact matchWoodridge, IL, United StatesHQ recorded Sep 29, 202611-501 contacts →

Exact match

“Shamrock Structures offers protein crystallography, medicinal chemistry and cell biology research services to enable clients to reduce the time from protein target to lead…”

Recorded in the RevenueBase company graph · Sep 29, 2026 · View company records in RevenueBase

Showing 23 of 55 protein structure prediction software companies based in the United States

See the full list, filter by size, metro and specialty, and access 2,121 tracked professional contacts with verified work emails. Direct dials are available where recorded.

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Protein structure prediction software companies based in the United States at a glance

As of Sep 29, 2026
67.6%Verified-email coverage
57.1Average contacts per company
1-10Median size (employees)
9.1%Largest-city concentration · New York
Sep 29, 2026Page data refreshed

Companies by employee count

1-10
31
11-50
17
51-200
3
201-500
2
501-1,000
1
1,001-5,000
1

Email recency for this list is measured worldwide rather than for United States, so it is reported there. Company counts and contact totals on this page are exact for United States, over 55 companies.

How this list was built

The recorded descriptions help you assess these company matches. Check a company’s website for its current services and locations.

Source
The RevenueBase company graph: 60 million companies and 398.9 million professional contacts resolved from primary sources, queried with RevenueBase SmartSearch, the natural-language company search available to every RevenueBase user.
What qualifies
Company records associated with the United States whose business descriptions match “protein structure prediction software companies” by meaning at the Exact setting. Descriptions are compiled in the RevenueBase company graph from public websites, profiles and company information where available; they are not guaranteed quotations from the company's website.
RevenueBase SmartSearch
Describe a niche company in your own words to find businesses by meaning. Exact, Similar, Related and Broad control the breadth of RevenueBase SmartSearch. This saved list uses Exact. Each row's Exact match badge shows inclusion in that search, not an individual score or a service-quality judgment.
Public preview
The public preview omits records without a verified work email. Where headquarters information is recorded, preview rows are also filtered to this page’s location. Dataset totals and geographic summaries describe the full matched records before these preview filters.
Match quality
RevenueBase's August 25, 2026 study assessed 4,198 description/company pairs across matching settings. The publisher reports 86% good or better at Exact. This evaluates the method across queries; it does not audit this individual list. Recorded company descriptions, where available, help you judge each match yourself. Read the full methodology: how the lists are built and what the study measures.
Ranking
Team size, largest first: companies are ordered by the number of professionals RevenueBase tracks at each one. Employee ranges shown are reported bands, for context.
Verification
Every displayed company carries at least one verified work email. RevenueBase tracks 2,121 professional contacts with verified work emails across the full matched dataset. Contacts re-verify on a rolling cadence, and each contact's own verification date is shown inside RevenueBase.
Refresh
This page's figures were pulled from the company graph on September 29, 2026. Lists refresh periodically as the graph is re-checked.
Record context
Company records and descriptions can change. Check the company's website for its current services and locations.

Frequently asked

What is RevenueBase SmartSearch?

RevenueBase SmartSearch finds niche companies by the meaning of their business descriptions in the RevenueBase company graph. Exact, Similar, Related and Broad control how closely companies must fit your description. This list uses Exact for “protein structure prediction software companies”; each Exact match badge shows search membership, not an individual similarity or quality score.

How many protein structure prediction software companies are there based in the United States?

RevenueBase identified 55 company matches for protein structure prediction software companies associated with the United States as of September 2026, using the meaning of business descriptions at Exact. This is the recorded matched set in the RevenueBase company graph.

What is the largest company on this list?

Certara tops the displayed preview by professional contacts tracked in RevenueBase. Recorded headquarters appear in the company rows.

Which city has the most protein structure prediction software companies?

New York leads with 5 company records, followed by San Diego (4) and San Francisco (4).

How do I get contact information for these companies?

A free RevenueBase account lets you run this exact search and work limited free results with 500 credits to start. Upgrading provides access to the 2,121 professional contacts with verified work emails tracked across these 55 companies; direct dials are available where recorded.

How current is this list?

The list refreshes periodically as the company graph is re-checked. This page's figures were pulled on September 29, 2026.

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About this data

RevenueBase is a B2B data infrastructure company. Its company graph covers 60 million companies and 398.9 million professional contacts, with emails verified on a rolling cadence rather than scraped once and left to decay. These company lists are generated directly from that graph with RevenueBase SmartSearch, the same natural-language company search every RevenueBase user has: describe a market in plain words, get the companies that match, and add verified emails and direct dials for the people at them. It is the same data that powers RevenueBase's B2B data products, and a free account includes 500 credits to start. How these lists are built and judged.