Company lists · Data refreshed September 2026

Top 25 Sequence alignment software companies worldwide

RevenueBase identified 86 sequence alignment software companies worldwide as of September 2026 and tracks 615 professional contacts across them, including 208 with verified work emails. The United States is the largest market and San Francisco the largest hub.

This list covers sequence alignment software companies worldwide, matched on what each company actually does as described in its own words. Ranked by team size, largest first. Every row shows the company's own description, its RevenueBase Smart Search rating, and when it was last checked. Data refreshed September 29, 2026. Country and city lists for sequence alignment software companies follow the table.

Published by RevenueBase, a B2B data infrastructure company. This list was built with RevenueBase Smart Search, the natural-language company search RevenueBase customers use to build their own targeted lists and unlock verified emails and direct dials at the companies on them. How these lists are built and judged.

How to read this list HQ checked on every row RevenueBase Smart Search rating on every row Refreshed Sep 29, 2026 86% judged on-target in blind review
86Companies
615Contacts tracked
208Verified emails
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The 25 largest sequence alignment software companies worldwide

Ranked by team size
Top 25 of 86 sequence alignment software companies worldwide, ranked by team size, largest first. Data refreshed Sep 29, 2026. RevenueBase Smart Search rates how each company's information relates to sequence alignment software companies: strong evidence (its own description names it), partial (names part of it), indirect (matched on the rest of its profile rather than the description shown). Click a contact count to view that company's people.
#CompanyRevenueBase Smart SearchHeadquartersEmployeesContacts
1Strong evidenceBoston, MA, United StatesHQ checked Sep 29, 202651-20059 contacts →

Strong evidence

“Protein Metrics' vendor-neutral software allows scientists to use data generated on analytical instruments like mass spectrometers to quickly identify and report protein sequences…”

Source: RevenueBase Database · checked Sep 29, 2026
2Indirect evidenceWaterloo, ON, CanadaHQ checked Sep 29, 202611-5050 contacts →

Indirect evidence

Source: RevenueBase Database · checked Sep 29, 2026
3Strong evidenceAnn Arbor, MI, United StatesHQ checked Sep 29, 202611-5032 contacts →

Strong evidence

“Gene Codes Corporation is an international software firm specializing in bioinformatics software for DNA sequence analysis.”

Source: RevenueBase Database · checked Sep 29, 2026
4Partial evidenceDen Bosch, NetherlandsHQ checked Sep 29, 202611-5027 contacts →

Partial evidence

“ENPICOM is an innovative bioinformatics software engineering company committed to accelerating biologics discovery and development through cutting-edge bioinformatics solutions.”

Source: RevenueBase Database · checked Sep 29, 2026
5Partial evidenceMadison, WI, United StatesHQ checked Sep 29, 202611-5026 contacts →

Partial evidence

“DNASTAR is a global software company that has been meeting the needs of life scientists for over 40 years by providing innovative and easy-to-use desktop software tools for…”

Source: RevenueBase Database · checked Sep 29, 2026
6Indirect evidenceSan Francisco, CA, United StatesHQ checked Sep 29, 202611-5025 contacts →

Indirect evidence

“We’re building the operating system for biology.”

Source: RevenueBase Database · checked Sep 29, 2026
7Indirect evidenceDerio, SpainHQ checked Sep 29, 202611-5024 contacts →

Indirect evidence

“NorayBio is a bioinformatics company that offers support to the biosciences sector, biotechnology, biomedicine and biopharmacy, through the development of new bioinformatic…”

Source: RevenueBase Database · checked Sep 29, 2026
8Partial evidencePavia, ItalyHQ checked Sep 29, 202611-5018 contacts →

Partial evidence

“enGenome provides the expertise and software technologies for the analysis and the interpretation of molecular data in order to support translational research and clinical…”

Source: RevenueBase Database · checked Sep 29, 2026
9Partial evidenceSan Francisco, CA, United StatesHQ checked Sep 29, 202651-20017 contacts →

Partial evidence

“PREMIER Biosoft is a leading bioinformatics company offering software products and services to government agencies, pharmaceutical and biotechnology companies and academia across…”

Source: RevenueBase Database · checked Sep 29, 2026
10Indirect evidenceNijmegen, NetherlandsHQ checked Sep 29, 202611-5014 contacts →

Indirect evidence

“Bio-Prodict is focused on delivering solutions for guiding scientific research in the field of protein engineering, molecular design and DNA diagnostics.”

Source: RevenueBase Database · checked Sep 29, 2026
11Partial evidenceAuckland, New ZealandHQ checked Sep 29, 2026501-1,00013 contacts →

Partial evidence

“Geneious develops bioinformatics software for molecular biologists, genomics researchers, and antibody discovery scientists.”

Source: RevenueBase Database · checked Sep 29, 2026
12Strong evidenceLong Island City, NY, United StatesHQ checked Sep 29, 202611-5013 contacts →

Strong evidence

“Gencove creates high-volume, cost-sensitive sequencing software-as-a-service to help academic, agriculture, biotech, diagnostic, and pharmaceutical companies get all the genomic…”

Source: RevenueBase Database · checked Sep 29, 2026
13Partial evidenceHerent, BelgiumHQ checked Sep 29, 202611-509 contacts →

Partial evidence

“Emweb is a software engineering company specializing in creating software through innovation and research.”

Source: RevenueBase Database · checked Sep 29, 2026
14Strong evidencePetaling Jaya, MalaysiaHQ checked Sep 29, 20261-108 contacts →

Strong evidence

“Novocraft Technologies is a bioinformatics company operating in the space of software and services for the fast-growing market of next-generation DNA sequencing technologies.”

Source: RevenueBase Database · checked Sep 29, 2026
15Indirect evidenceNew Delhi, IndiaHQ checked Sep 29, 20261-108 contacts →

Indirect evidence

“Mentor - Prof.”

Source: RevenueBase Database · checked Sep 29, 2026
16Partial evidenceMountain View, CA, United StatesHQ checked Sep 29, 20261-107 contacts →

Partial evidence

“Sentieon's software dramatically improves the performance of bioinformatics tools.”

Source: RevenueBase Database · checked Sep 29, 2026
17Indirect evidenceAkron, OH, United StatesHQ checked Sep 29, 20261-107 contacts →

Indirect evidence

“NicheVision Forensics LLC is a company based out of 526 S.”

Source: RevenueBase Database · checked Sep 29, 2026
18Indirect evidenceUnited StatesHQ checked Sep 29, 20261-107 contacts →

Indirect evidence

“Fearless League | For Bold Biologists Every great discovery starts with a fearless mind.”

Source: RevenueBase Database · checked Sep 29, 2026
19Indirect evidenceValencia, SpainHQ checked Sep 29, 202611-507 contacts →

Indirect evidence

“BioBam is a leading bioinformatics solution provider which accelerate research in disciplines such as agricultural genomics, microbiology and environmental NGS studies, amongst…”

Source: RevenueBase Database · checked Sep 29, 2026
20Strong evidenceCape Town, South AfricaHQ checked Sep 29, 20261-107 contacts →

Strong evidence

“Hyrax Biosciences isa DNA sequence analysis software company that simplifies sequence analysis.”

Source: RevenueBase Database · checked Sep 29, 2026
21Indirect evidenceState College, PA, United StatesHQ checked Sep 29, 202611-505 contacts →

Indirect evidence

“SoftGenetics, LLC is a biotechnology company based out of 100 Oakwood Avenue Suite 350, State College, Pennsylvania, United States.”

Source: RevenueBase Database · checked Sep 29, 2026
22Strong evidenceEttenheim, GermanyHQ checked Sep 29, 202611-505 contacts →

Strong evidence

“JSI medical systems is offering bio-informatic software solutions covering a wide field of sequencing techniques such as Sanger sequencing, Next Generation Sequencing, HLA SBT and…”

Source: RevenueBase Database · checked Sep 29, 2026
23Partial evidenceGemenos, FranceHQ checked Sep 29, 20261-103 contacts →

Partial evidence

“Xegen is a bioinformatics company specialized in Next Generation Sequencing (NGS) data analysis.”

Source: RevenueBase Database · checked Sep 29, 2026
24Partial evidenceUnited StatesHQ checked Sep 29, 20261-103 contacts →

Partial evidence

“NinthBio is a software company serving Biotech.”

Source: RevenueBase Database · checked Sep 29, 2026
25Partial evidenceEmeryville, CA, United StatesHQ checked Sep 29, 20261-102 contacts →

Partial evidence

“Toyoko bridges the gap between life science professionals and software developers.”

Source: RevenueBase Database · checked Sep 29, 2026

Showing 25 of 86 sequence alignment software companies worldwide

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Sequence alignment software companies worldwide at a glance

As of Sep 29, 2026
33.8%Verified-email coverage
7.2Average contacts per company
1-10Median size (employees)
5.8%Largest-city concentration · San Francisco
Sep 29, 2026Page data refreshed

Companies by employee count

1-10
57
11-50
22
51-200
6
501-1,000
1

Email recency is reported on each country list linked below.

How this list was built

Company categories are rarely black and white. RevenueBase reads each company's own description of its business to decide whether it belongs among sequence alignment software companies, so some rows will be adjacent to the category rather than pure plays. The description and RevenueBase Smart Search rating on every row are there so you can check each match yourself.

Source
The RevenueBase company graph: 60 million companies and 398.9 million professional contacts resolved from primary sources, queried with RevenueBase Smart Search, the natural-language company search available to every RevenueBase user.
Coverage
Every country. Country and city lists for sequence alignment software companies are linked below.
What qualifies
Companies worldwide whose own description of what they do matches “sequence alignment software companies”. Matching reads each company's description, not its industry code or its name.
RevenueBase Smart Search
RevenueBase Smart Search is how this list is assembled and how each row is rated. RevenueBase's data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to a category defined in a user's own words. Each row is rated strong evidence (its own description names sequence alignment software companies), partial evidence (it names part of the category) or indirect evidence (the description shown names none of it and the match rests on the rest of the company's profile). The description supporting each rating is quoted on the row.
What we exclude
Companies whose own description does not clearly place them among sequence alignment software companies, and records with no verified work email.
Match quality
In blind human judging of this matching method, 86% of matched companies were on target. Expect roughly 1 in 7 rows to be adjacent to the category rather than a pure play. Every row shows the company's own description and its RevenueBase Smart Search rating so you can judge each match yourself. Read the full methodology: how the lists are built, how the judging worked, and what the figure means.
Ranking
Team size, largest first: companies are ordered by the number of professionals RevenueBase tracks at each one. Employee ranges shown are reported bands, for context.
Verification
Every listed company carries at least one verified work email, 208 across the full list. Contacts re-verify on a rolling cadence, and each contact's own verification date is shown inside RevenueBase.
Refresh
This page's figures were pulled from the company graph on September 29, 2026. Lists refresh periodically as the graph is re-checked.
Corrections
Wrong category, wrong headquarters, or a company that has closed? Use “Report an issue” on any row. Reports go to the RevenueBase Data Team and feed back into the company graph.

Sequence alignment software companies by location

1 lists · largest first

Every Sequence alignment software companies list RevenueBase publishes, by country and city. Counts are matching companies in each list as of its own refresh date.

Countries

Frequently asked

What is RevenueBase Smart Search?

RevenueBase Smart Search is how RevenueBase decides which companies belong on this list and how strongly each one fits. Its data engine and AI assess a company's LinkedIn profile, information supplied directly by the company, its website and other publicly available information, then relate it to the category the list is about. Each row is rated strong evidence when the company's own description names sequence alignment software companies, partial evidence when it names part of the category, and indirect evidence when the description shown names none of it and the match rests on the rest of the company's profile.

How many sequence alignment software companies are there worldwide?

RevenueBase identified 86 sequence alignment software companies worldwide as of September 2026, matched on each company's own description of what it does rather than its industry code.

What is the largest company on this list?

Protein Metrics, LLC, headquartered in Boston, tops this list with the largest team on record.

Which country has the most sequence alignment software companies?

The United States leads with 28 companies. Every sequence alignment software companies list by country and city is linked on this page.

Which city has the most sequence alignment software companies?

San Francisco leads with 5 headquartered companies, followed by London (2) and Abbottabad Kpk (1).

How do I get contact information for these companies?

A free RevenueBase account lets you run this exact search and work the top results, verified emails and direct dials included. Upgrading unlocks all 208 verified decision-maker contacts tracked across these 86 companies.

How current is this list?

The list refreshes periodically as the company graph is re-checked. This page's figures were pulled on September 29, 2026.

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About this data

RevenueBase is a B2B data infrastructure company. Its company graph covers 60 million companies and 398.9 million professional contacts, with emails verified on a rolling cadence rather than scraped once and left to decay. These company lists are generated directly from that graph with RevenueBase Smart Search, the same natural-language company search every RevenueBase user has: describe a market in plain words, get the companies that match, and add verified emails and direct dials for the people at them. It is the same data that powers RevenueBase's B2B data products, and a free account includes 500 credits to start. How these lists are built and judged.